STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1U6A6Uncharacterized protein. (730 aa)    
Predicted Functional Partners:
A0A1Y1UJ10
Uncharacterized protein.
    
 0.635
A0A1Y1URG3
WSC domain-containing protein.
     
 0.617
A0A1Y1UHC4
Uncharacterized protein.
   
    0.527
A0A1Y1UQH5
Autophagy-related protein 27.
   
 
  0.504
A0A1Y1UBG4
Uncharacterized protein.
   
    0.503
A0A1Y1UME8
ATP-NAD kinase-like domain-containing protein.
     
 0.480
A0A1Y1USE2
ATP-NAD kinase-like domain-containing protein.
     
 0.480
A0A1Y1U7W0
Uncharacterized protein.
   
 
 0.457
A0A1Y1UH85
Uncharacterized protein.
   
 
 0.457
A0A1Y1ULT4
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
  0.457
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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