STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1U6Z9Putative phosphorolytic exoribonuclease. (253 aa)    
Predicted Functional Partners:
A0A1Y1UFN5
Putative exosome complex exonuclease rrp4.
   
 0.999
A0A1Y1UMK7
RNase_PH domain-containing protein.
  
 0.999
A0A1Y1UQ59
Uncharacterized protein.
  
 0.999
A0A1Y1URY2
Ribosomal protein S5 domain 2-type protein.
   
 0.999
A0A1Y1USX2
S1 CSL4 protein.
   
 0.999
A0A1Y1UT67
Ribosomal protein S5 domain 2-type protein.
   
 0.999
A0A1Y1UAC8
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 0.997
A0A1Y1U7R6
3' exoribonuclease family, domain 1-domain-containing protein.
   
0.996
A0A1Y1U675
Putative ATP-dependent RNA helicase.
   
 0.986
A0A1Y1UFH5
Uncharacterized protein.
   
 0.982
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.