STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UCI6DNA dependent ATPase. (587 aa)    
Predicted Functional Partners:
A0A1Y1UFC8
Putative transcriptional elongation regulator; Belongs to the SKP1 family.
    
 0.967
A0A1Y1UQX8
Cullin; Belongs to the cullin family.
    
 0.830
A0A1Y1U7Q6
Uncharacterized protein.
   
 0.789
A0A1Y1USL1
SconCp; Belongs to the SKP1 family.
   
 0.789
A0A1Y1UUG4
Uncharacterized protein.
    
 0.775
A0A1Y1UGG7
Putative ubiquitin-protein ligase; Belongs to the cullin family.
    
 0.770
A0A1Y1UR13
RING-type domain-containing protein.
    
 0.732
A0A1Y1UIW4
SNF2 family N-terminal domain-domain-containing protein.
    
 
 0.705
A0A1Y1UJ53
Uncharacterized protein.
    
 
 0.705
A0A1Y1UI72
Uncharacterized protein.
    
 
 0.700
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.