STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UE80Peptidase M50B-like-domain-containing protein. (329 aa)    
Predicted Functional Partners:
A0A1Y1UDR4
EGF-like domain-containing protein.
   
 0.605
A0A1Y1UAC7
14-3-3 domain-containing protein; Belongs to the 14-3-3 family.
   
 0.602
A0A1Y1UF90
Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid.
    
  0.582
A0A1Y1URG3
WSC domain-containing protein.
    
 0.577
A0A1Y1U733
TPR_REGION domain-containing protein.
    
 0.550
A0A1Y1UIJ9
Protein kinase domain-containing protein.
    
  0.543
A0A1Y1UNU8
Uncharacterized protein.
    
  0.535
A0A1Y1UPJ0
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
    
  0.534
A0A1Y1UFL8
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.522
A0A1Y1UAV9
WD40-repeat-containing domain protein.
    
  0.519
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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