STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UG17Spo11/DNA topoisomerase VI subunit A. (619 aa)    
Predicted Functional Partners:
A0A1Y1UD20
WD40-repeat-containing domain protein.
    
 
 0.866
A0A1Y1UUL9
DNA recombination and repair protein Rad51; Belongs to the RecA family.
    
 0.835
A0A1Y1UKJ3
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.812
A0A1Y1UU68
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
    
 0.810
A0A1Y1UI56
AAA_23 domain-containing protein.
    
 0.800
A0A1Y1U5Z4
ERCC4 domain-containing protein.
    
 
 0.767
A0A1Y1U8Z6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.741
A0A1Y1UTB1
Uncharacterized protein.
    
 
 0.735
A0A1Y1U876
Rad51 domain-containing protein.
    
 0.717
A0A1Y1UCJ6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.717
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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