STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UHW1Uncharacterized protein. (250 aa)    
Predicted Functional Partners:
A0A1Y1UNI3
WD40-repeat-containing domain protein.
   
   0.929
A0A1Y1UH13
Bystin-domain-containing protein.
   
   0.919
A0A1Y1ULN2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.916
A0A1Y1UJK2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.902
A0A1Y1UJR3
Armadillo-type protein.
   
   0.901
A0A1Y1U9V5
Fibrillarin-domain-containing protein.
   
   0.896
A0A1Y1UEP6
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.895
A0A1Y1UMX5
Protein MAK16; Belongs to the MAK16 family.
   
   0.798
A0A1Y1UT72
Surfeit locus protein 6-domain-containing protein.
   
 
 0.719
A0A1Y1URG5
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.
   
 
 0.707
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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