STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UI72Uncharacterized protein. (731 aa)    
Predicted Functional Partners:
A0A1Y1UUG4
Uncharacterized protein.
   
 0.999
A0A1Y1UBN5
Small ubiquitin-related modifier.
     
 0.978
A0A1Y1UCB4
TFIIH p62 subunit, N-terminal domain-domain-containing protein.
    
 0.973
A0A1Y1UDK3
EF-hand calcium-binding protein, Caltractin-cdc31 subfamily.
    
 0.961
A0A1Y1U9M4
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
    
 0.960
A0A1Y1USU3
Putative general RNA polymerase II transcription factor.
   
 0.955
A0A1Y1UG45
Helicase ATP-binding domain-containing protein.
    
 0.926
A0A1Y1UTJ2
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
   
 0.897
A0A1Y1UN41
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.888
A0A1Y1UL59
XPA protein C-terminus-domain-containing protein.
    
 0.887
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.