STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UID6GRASP55/65 PDZ-like domain-domain-containing protein. (251 aa)    
Predicted Functional Partners:
A0A1Y1U6B9
Serine/threonine-protein kinase.
   
 0.981
A0A1Y1UC72
P115 like vesicle tethering protein.
   
 0.919
A0A1Y1UNF1
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.885
A0A1Y1UNN8
WW domain-containing protein.
   
 0.883
A0A1Y1UBI2
Putative ras-related protein ypt1.
   
 0.853
A0A1Y1UCY9
Integral membrane protein sed5.
    
 0.826
A0A1Y1UMH9
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.817
A0A1Y1UAB0
GTPase.
   
 0.806
A0A1Y1UTI5
Uncharacterized protein.
   
 0.803
A0A1Y1UEM2
t-SNARE coiled-coil homology domain-containing protein.
    
 0.783
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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