STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UMZ3Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family. (920 aa)    
Predicted Functional Partners:
A0A1Y1UGU2
E3 ubiquitin-protein ligase PEP5.
   
 0.998
A0A1Y1UB30
CNH domain-containing protein.
   
 0.997
A0A1Y1UHD5
Pep3/Vps18/deep orange family-domain-containing protein.
    
 0.997
A0A1Y1UK62
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.997
A0A1Y1UQ13
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 0.997
A0A1Y1UH05
CNH domain-containing protein.
   
 0.994
A0A1Y1UAI1
Vacuolar fusion protein MON1.
    
 
 0.959
A0A1Y1UI78
t-SNARE.
    
 
 0.956
A0A1Y1UB87
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.953
A0A1Y1UC62
Uncharacterized protein.
    
 
 0.953
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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