STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UPH6RING-type domain-containing protein. (671 aa)    
Predicted Functional Partners:
A0A1Y1U839
CCR4-Not complex component, Not1-domain-containing protein.
    
 0.998
A0A1Y1UMD2
Uncharacterized protein.
    
 0.996
A0A1Y1UC89
Ribonuclease H-like domain-containing protein.
    
 0.992
A0A1Y1ULJ6
Not1 N-terminal domain, CCR4-Not complex component-domain-containing protein.
   
 0.987
A0A1Y1UPF5
Endonuclease/exonuclease/phosphatase.
    
 0.987
A0A1Y1U5F6
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 0.968
A0A1Y1UD84
NOT2_3_5 domain-containing protein.
    
 0.959
A0A1Y1UV21
Topoisomerase II-associated protein PAT1.
    
 
 0.942
A0A1Y1UEA6
CUE domain-containing protein.
    
 0.939
A0A1Y1U675
Putative ATP-dependent RNA helicase.
    
 
 0.933
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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