STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UPU7Nsp1-like C-terminal region-domain-containing protein. (808 aa)    
Predicted Functional Partners:
A0A1Y1U8S5
Nucleoporin complex subunit 54-domain-containing protein.
   
 0.999
A0A1Y1UFG3
RanBD1 domain-containing protein.
   
 0.999
A0A1Y1UST3
Uncharacterized protein.
   
 0.999
A0A1Y1U8A5
Nuclear pore protein.
   
 0.997
A0A1Y1UAB1
Nucleoporin Nup186/Nup192/Nup205.
   
 0.997
A0A1Y1UF73
Uncharacterized protein.
   
 0.996
A0A1Y1U8R6
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.990
A0A1Y1URR9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.985
A0A1Y1UBA7
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.984
A0A1Y1UQG0
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.983
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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