STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1URJ6Ubiquitin-domain-containing protein. (153 aa)    
Predicted Functional Partners:
A0A1Y1UBQ3
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.993
A0A1Y1UDT0
Ribosomal protein S5, N-terminal domain-domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.993
A0A1Y1UIJ3
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.993
A0A1Y1UMS7
Plectin/S10 domain-domain-containing protein.
   
 0.993
A0A1Y1UN26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.993
A0A1Y1UN58
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.993
A0A1Y1UQ25
Ribosomal protein S17e.
   
 0.993
A0A1Y1U7V5
Putative ribosomal protein S20.
   
 0.992
A0A1Y1U906
Ribosomal protein L14-domain-containing protein.
   
 0.992
A0A1Y1U915
Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 0.992
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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