STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1UTI5Uncharacterized protein. (1024 aa)    
Predicted Functional Partners:
A0A1Y1UNF1
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
A0A1Y1UNN8
WW domain-containing protein.
   
0.999
A0A1Y1UQG0
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
   
 0.990
A0A1Y1UFL8
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.985
A0A1Y1UD19
WD_REPEATS_REGION domain-containing protein.
   
 0.948
A0A1Y1UDW5
Mss4-like protein.
   
 0.873
A0A1Y1UR91
ARF/SAR protein; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.833
A0A1Y1UCY9
Integral membrane protein sed5.
    
 0.819
A0A1Y1UAV9
WD40-repeat-containing domain protein.
   
 0.810
A0A1Y1UID6
GRASP55/65 PDZ-like domain-domain-containing protein.
   
 0.803
Your Current Organism:
Kockovaella imperatae
NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae
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