A0A1Y1UUD9 protein (Kockovaella imperatae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y1UUD9

ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1523 aa)

Predicted Functional Partners:

A0A1Y1URT4

0.765

A0A1Y1U8J9

0.704

A0A1Y1USJ2

0.647

A0A1Y1UFB0

0.620

A0A1Y1URM3

0.601

A0A1Y1US86

0.601

A0A1Y1U9C0

0.549

A0A1Y1UHJ9

0.549

A0A1Y1UKB9

0.549

A0A1Y1UNM4

0.549

Your Current Organism:

Kockovaella imperatae

NCBI taxonomy Id: 4999
Other names: CBS 7554, IFO 10522, IGC 5360, JCM 7826, K. imperatae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1U8J9	A0A1Y1URT4	TAP42-like protein.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.704
A0A1Y1U8J9	A0A1Y1UUD9	TAP42-like protein.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.704
A0A1Y1U9C0	A0A1Y1URT4	tRNA_int_endo domain-containing protein.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1U9C0	A0A1Y1UUD9	tRNA_int_endo domain-containing protein.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1UFB0	A0A1Y1URT4	Putative 1,4-alpha-glucan branching enzyme.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.620
A0A1Y1UFB0	A0A1Y1UUD9	Putative 1,4-alpha-glucan branching enzyme.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.620
A0A1Y1UHJ9	A0A1Y1URT4	Uncharacterized protein.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1UHJ9	A0A1Y1UUD9	Uncharacterized protein.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1UKB9	A0A1Y1URT4	Uncharacterized protein.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1UKB9	A0A1Y1UUD9	Uncharacterized protein.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1UNM4	A0A1Y1URT4	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1UNM4	A0A1Y1UUD9	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.549
A0A1Y1URM3	A0A1Y1URT4	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.601
A0A1Y1URM3	A0A1Y1UUD9	3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.	ABC-2 type transporter-domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.601
A0A1Y1URT4	A0A1Y1U8J9	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	TAP42-like protein.	0.704
A0A1Y1URT4	A0A1Y1U9C0	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	tRNA_int_endo domain-containing protein.	0.549
A0A1Y1URT4	A0A1Y1UFB0	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	Putative 1,4-alpha-glucan branching enzyme.	0.620
A0A1Y1URT4	A0A1Y1UHJ9	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	Uncharacterized protein.	0.549
A0A1Y1URT4	A0A1Y1UKB9	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	Uncharacterized protein.	0.549
A0A1Y1URT4	A0A1Y1UNM4	Putative ATP-binding cassette transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.549