STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g07530Pc12g07530 protein. (956 aa)    
Predicted Functional Partners:
Pc16g12450
Pc16g12450 protein.
    
 0.855
Pc21g03150
Pc21g03150 protein.
   
 0.749
Pc21g19040
Pc21g19040 protein.
     
 0.726
Pc16g02340
Pc16g02340 protein.
     
 0.648
Pc21g03430
Pc21g03430 protein.
    
 0.648
Pc22g25230
Pc22g25230 protein.
    
 0.625
Pc12g08650
Pc12g08650 protein.
   
  
 0.624
Pc12g07610
Pc12g07610 protein.
    
 0.611
Pc12g16060
Pc12g16060 protein; Belongs to the AAA ATPase family.
    
0.611
Pc13g02590
Pc13g02590 protein.
    
 0.605
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.