STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g04310Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. (453 aa)    
Predicted Functional Partners:
Pc12g05820
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
     
 0.960
Pc20g01960
Pc20g01960 protein.
    
  0.902
Pc21g20020
Pc21g20020 protein.
    
 0.901
Pc20g04820
Pc20g04820 protein.
  
 
  0.900
Pc20g13550
Malate synthase; Belongs to the malate synthase family.
  
 
 0.849
Pc12g04750
Pc12g04750 protein; Belongs to the LDH/MDH superfamily.
  
 0.835
Pc20g01610
Malate dehydrogenase.
  
 0.835
Pc21g22090
Malate dehydrogenase.
  
 0.835
Pc22g23810
Pc22g23810 protein.
  
 
 0.823
Pc13g04510
Malic enzyme.
    
 0.820
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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