STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g04740Pc12g04740 protein. (187 aa)    
Predicted Functional Partners:
Pc20g00400
Pc20g00400 protein.
   
 0.999
Pc12g00430
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.998
Pc20g01070
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.998
Pc21g19050
Pc21g19050 protein.
   
 0.998
Pc21g11830
Trafficking protein particle complex subunit BET3.
   
 0.998
Pc21g08610
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.998
Pc13g03890
Pc13g03890 protein.
   
 0.997
Pc13g13160
Pc13g13160 protein.
    
 0.987
Pc16g02130
Pc16g02130 protein.
   
 0.977
Pc20g11530
Pc20g11530 protein.
   
 0.977
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.