STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g08970Pc12g08970 protein. (212 aa)    
Predicted Functional Partners:
Pc21g06090
Pc21g06090 protein.
    
 0.791
Pc18g06300
Pc18g06300 protein.
    
   0.653
Pc21g00980
Uncharacterized protein.
    
 0.584
Pc21g22050
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.579
Pc21g04310
Pc21g04310 protein.
    
 0.551
Pc21g07370
Pc21g07370 protein.
    
  0.538
Pc13g09710
Arginase; Belongs to the arginase family.
    
 
 0.494
Pc16g14910
F-box domain-containing protein.
    
 0.473
Pc22g08350
Pc22g08350 protein.
    
 0.473
Pc13g03740
Pc13g03740 protein.
    
 0.472
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.