Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pc12g09140 | Pc12g10840 | B6GZ74 | B6H106 | Pc12g09140 protein. | Pc12g10840 protein. | 0.794 |
Pc12g09140 | Pc12g10850 | B6GZ74 | B6H107 | Pc12g09140 protein. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.961 |
Pc12g09140 | Pc13g05910 | B6GZ74 | B6H379 | Pc12g09140 protein. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.732 |
Pc12g09140 | Pc13g06240 | B6GZ74 | B6H3E7 | Pc12g09140 protein. | Pc13g06240 protein. | 0.670 |
Pc12g09140 | Pc13g07220 | B6GZ74 | B6H3S1 | Pc12g09140 protein. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.761 |
Pc12g09140 | Pc13g09510 | B6GZ74 | B6H433 | Pc12g09140 protein. | Pc13g09510 protein. | 0.644 |
Pc12g09140 | Pc13g15730 | B6GZ74 | B6H2Y6 | Pc12g09140 protein. | Pc13g15730 protein. | 0.861 |
Pc12g09140 | Pc20g03710 | B6GZ74 | B6HGT4 | Pc12g09140 protein. | Pc20g03710 protein. | 0.847 |
Pc12g09140 | Pc22g05430 | B6GZ74 | B6HUS8 | Pc12g09140 protein. | Pc22g05430 protein. | 0.751 |
Pc12g09140 | Pc22g21670 | B6GZ74 | B6HSY0 | Pc12g09140 protein. | Pc22g21670 protein. | 0.683 |
Pc12g10840 | Pc12g09140 | B6H106 | B6GZ74 | Pc12g10840 protein. | Pc12g09140 protein. | 0.794 |
Pc12g10840 | Pc12g10850 | B6H106 | B6H107 | Pc12g10840 protein. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.854 |
Pc12g10840 | Pc13g09510 | B6H106 | B6H433 | Pc12g10840 protein. | Pc13g09510 protein. | 0.771 |
Pc12g10840 | Pc20g03710 | B6H106 | B6HGT4 | Pc12g10840 protein. | Pc20g03710 protein. | 0.597 |
Pc12g10850 | Pc12g09140 | B6H107 | B6GZ74 | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | Pc12g09140 protein. | 0.961 |
Pc12g10850 | Pc12g10840 | B6H107 | B6H106 | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | Pc12g10840 protein. | 0.854 |
Pc12g10850 | Pc13g05910 | B6H107 | B6H379 | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.834 |
Pc12g10850 | Pc13g06240 | B6H107 | B6H3E7 | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | Pc13g06240 protein. | 0.844 |
Pc12g10850 | Pc13g07220 | B6H107 | B6H3S1 | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.935 |
Pc12g10850 | Pc13g09510 | B6H107 | B6H433 | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | Pc13g09510 protein. | 0.906 |
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