STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g09220Pc12g09220 protein. (756 aa)    
Predicted Functional Partners:
Pc13g08290
Pc13g08290 protein.
    
 
 0.935
Pc13g06260
Pc13g06260 protein.
    
 
 0.656
Pc21g07370
Pc21g07370 protein.
    
 
 0.520
Pc13g14520
Pc13g14520 protein.
    
 0.462
Pc13g10080
Pc13g10080 protein.
    
 0.462
Pc14g01930
Pc14g01930 protein.
    
 0.462
Pc20g07530
Pc20g07530 protein.
    
 0.462
Pc20g03060
Pc20g03060 protein.
    
 0.462
Pc21g03030
Pc21g03030 protein.
    
 0.462
Pc22g09010
Pc22g09010 protein.
    
 0.462
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.