STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g09400Peroxin-11 Pex11-Penicillium chrysogenum. (238 aa)    
Predicted Functional Partners:
Pc18g00900
Peroxin-19 Pex19-Penicillium chrysogenum.
   
 0.976
Pc13g10540
Peroxisomal docking factor component Pex14-Penicillium chrysogenum.
    
 0.933
Pc20g10900
Peroxisomal docking factor component Pex13-Penicillium chrysogenum.
   
 0.914
Pc21g19110
Peroxisome assembly protein Pex12-Penicillium chrysogenum.
   
 0.878
Pc21g01160
Peroxisomal matrix protein importer Pex3-Penicillium chrysogenum.
   
 0.869
Pc12g11550
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.860
Pc12g05220
Peroxisomal membrane protein PEX16.
   
 
 0.837
Pc20g09870
Pc20g09870 protein.
     
 0.814
Pc16g09390
Pc16g09390 protein.
   
 
 0.734
Pc13g06080
Pc13g06080 protein; Belongs to the AAA ATPase family.
    
 0.729
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.