STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g13310Pc12g13310 protein. (383 aa)    
Predicted Functional Partners:
Pc21g18600
Pc21g18600 protein.
     
  0.900
Pc21g23150
Pc21g23150 protein.
     
  0.900
Pc16g02790
Pc16g02790 protein.
  
 
 0.571
Pc21g14560
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.564
Pc12g15080
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
  0.488
Pc14g00390
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.482
pgkA
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.470
Pc16g00620
Glucoamylase.
  
 0.459
Pc18g06000
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.459
Pc22g01850
Glucan 1,4-alpha-glucosidase BAC8255-Penicillium chrysogenum.
  
 0.459
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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