Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pc12g13310 | Pc12g15080 | B6GZT0 | B6GX77 | Pc12g13310 protein. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.488 |
Pc12g13310 | Pc14g00390 | B6GZT0 | B6H5K9 | Pc12g13310 protein. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.482 |
Pc12g13310 | Pc16g00620 | B6GZT0 | B6H6W4 | Pc12g13310 protein. | Glucoamylase. | 0.459 |
Pc12g13310 | Pc16g02790 | B6GZT0 | B6H7J3 | Pc12g13310 protein. | Pc16g02790 protein. | 0.571 |
Pc12g13310 | Pc18g06000 | B6GZT0 | B6HCH7 | Pc12g13310 protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.459 |
Pc12g13310 | Pc21g14560 | B6GZT0 | B6HI59 | Pc12g13310 protein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.564 |
Pc12g13310 | Pc21g18600 | B6GZT0 | B6HHT0 | Pc12g13310 protein. | Pc21g18600 protein. | 0.900 |
Pc12g13310 | Pc21g23150 | B6GZT0 | B6HI91 | Pc12g13310 protein. | Pc21g23150 protein. | 0.900 |
Pc12g13310 | Pc22g01850 | B6GZT0 | B6HPB5 | Pc12g13310 protein. | Glucan 1,4-alpha-glucosidase BAC8255-Penicillium chrysogenum. | 0.459 |
Pc12g13310 | pgkA | B6GZT0 | B6H903 | Pc12g13310 protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.470 |
Pc12g15080 | Pc12g13310 | B6GX77 | B6GZT0 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Pc12g13310 protein. | 0.488 |
Pc12g15080 | Pc14g00390 | B6GX77 | B6H5K9 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
Pc12g15080 | Pc16g02790 | B6GX77 | B6H7J3 | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | Pc16g02790 protein. | 0.966 |
Pc14g00390 | Pc12g13310 | B6H5K9 | B6GZT0 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Pc12g13310 protein. | 0.482 |
Pc14g00390 | Pc12g15080 | B6H5K9 | B6GX77 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.999 |
Pc14g00390 | Pc16g02790 | B6H5K9 | B6H7J3 | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | Pc16g02790 protein. | 0.963 |
Pc16g00620 | Pc12g13310 | B6H6W4 | B6GZT0 | Glucoamylase. | Pc12g13310 protein. | 0.459 |
Pc16g00620 | Pc21g14560 | B6H6W4 | B6HI59 | Glucoamylase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.888 |
Pc16g00620 | Pc22g01850 | B6H6W4 | B6HPB5 | Glucoamylase. | Glucan 1,4-alpha-glucosidase BAC8255-Penicillium chrysogenum. | 0.902 |
Pc16g00620 | pgkA | B6H6W4 | B6H903 | Glucoamylase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.835 |
page 1 of 3