STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc12g13960Pc12g13960 protein. (72 aa)    
Predicted Functional Partners:
Pc12g16250
Pc12g16250 protein.
    
 0.891
Pc12g15080
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.889
Pc14g00390
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.838
Pc13g11400
Spindle pole body component.
    
 
 0.830
Pc22g01580
Pc22g01580 protein.
    
 0.829
Pc16g01750
Pc16g01750 protein.
    
 0.791
Pc21g06400
Pc21g06400 protein.
   
 0.757
Pc12g03360
Pc12g03360 protein.
  
 
 0.712
Pc12g16020
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.680
Pc13g05010
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.680
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.