STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g02940Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (460 aa)    
Predicted Functional Partners:
Pc20g11850
Pc20g11850 protein.
   
 0.999
Pc21g23710
Pc21g23710 protein; Belongs to the GST superfamily.
   
 0.999
Pc13g08810
Pc13g08810 protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.993
Pc21g13620
Pc21g13620 protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.981
Pc18g02110
Pc18g02110 protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.975
Pc22g01260
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.974
rps1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.968
Pc20g00710
Pc20g00710 protein.
   
 0.968
Pc22g06950
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.964
Pc12g06650
Pc12g06650 protein.
   
 
 0.961
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.