STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g01620Pc13g01620 protein. (870 aa)    
Predicted Functional Partners:
Pc20g00850
Pc20g00850 protein.
    
 0.550
Pc13g11700
Pc13g11700 protein; Belongs to the cullin family.
    
 0.521
Pc22g09940
Pc22g09940 protein; Belongs to the cullin family.
    
 0.521
Pc21g05360
Pc21g05360 protein.
   
 0.501
Pc22g08180
Pc22g08180 protein.
   
 0.501
Pc22g22670
Pc22g22670 protein.
   
 0.501
Pc21g20230
Pc21g20230 protein; Belongs to the SKP1 family.
    
 0.433
Pc13g11890
Pc13g11890 protein.
    
 0.432
Pc22g12390
Pc22g12390 protein.
    
 0.432
Pc13g04610
Pc13g04610 protein.
    
 0.418
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.