STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g05680Pc13g05680 protein. (1002 aa)    
Predicted Functional Partners:
Pc13g12280
Pc13g12280 protein.
   
 0.999
Pc20g01300
Pc20g01300 protein.
   
 0.999
Pc21g09050
Pc21g09050 protein.
   
 0.999
Pc13g12830
Pc13g12830 protein.
   
 0.997
Pc13g13350
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.997
Pc18g03910
Pc18g03910 protein.
   
 0.997
Pc22g06700
Pc22g06700 protein.
   
 0.997
Pc15g00550
Pc15g00550 protein; Belongs to the WD repeat SEC13 family.
   
 0.994
Pc21g12290
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.993
Pc12g10280
Pc12g10280 protein.
    
 0.991
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.