STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g12750Pc13g12750 protein. (564 aa)    
Predicted Functional Partners:
Pc16g08330
Pc16g08330 protein; Belongs to the cytochrome P450 family.
   
 0.974
Pc22g07520
Pc22g07520 protein; Belongs to the cytochrome P450 family.
   
 0.974
Pc20g13170
Pc20g13170 protein.
  
  
 
0.902
Pc22g11560
Pc22g11560 protein.
  
  
 
0.902
Pc22g15550
Pc22g15550 protein.
   
 
 0.860
Pc22g06030
Pc22g06030 protein.
   
 
 0.843
Pc12g00300
Pc12g00300 protein.
   
 
 0.833
Pc15g00150
Pc15g00150 protein.
   
 
 0.827
Pc13g05570
Pc13g05570 protein; Belongs to the sterol desaturase family.
   
 0.788
Pc21g21280
Pc21g21280 protein; Belongs to the sterol desaturase family.
   
 0.788
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.