STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g06730Pc13g06730 protein. (607 aa)    
Predicted Functional Partners:
Pc22g15540
Pc22g15540 protein.
  
 
  0.472
Pc12g12700
Pc12g12700 protein.
  
 
  0.466
Pc12g10860
Pc12g10860 protein.
  
 
  0.456
Pc20g13290
Pc20g13290 protein.
  
     0.455
Pc13g10750
Pc13g10750 protein.
  
     0.445
Pc13g12170
Pc13g12170 protein.
  
 
   0.445
Pc16g03960
Pc16g03960 protein.
  
 
   0.444
Pc16g07890
Pc16g07890 protein.
  
     0.440
Pc21g08960
Pc21g08960 protein.
  
 
  0.433
Pc18g02090
Pc18g02090 protein.
  
 
  0.428
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.