STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc13g10330Pc13g10330 protein; Belongs to the protein kinase superfamily. (409 aa)    
Predicted Functional Partners:
Pc12g04690
Pc12g04690 protein.
    
 
 0.725
Pc13g10760
Pc13g10760 protein.
    
 0.648
Pc16g04650
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
  0.642
Pc22g09890
Pc22g09890 protein.
   
 0.638
Pc13g12640
Pc13g12640 protein.
  
 
 0.514
Pc18g03390
Pc18g03390 protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.
   
 0.477
Pc21g08310
Pc21g08310 protein.
   
 0.477
Pc21g08320
Pc21g08320 protein.
   
 0.477
Pc12g16470
Pc12g16470 protein.
    
 0.452
Pc22g05580
Pc22g05580 protein.
    
 
 0.443
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.