STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc15g01820Pc15g01820 protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (334 aa)    
Predicted Functional Partners:
Pc21g12880
Pc21g12880 protein.
      
 0.659
Pc21g23830
Pc21g23830 protein.
      
 0.627
Pc21g23860
Pc21g23860 protein.
      
 0.627
Pc22g06330
Pc22g06330 protein.
     
 0.622
Pc13g10810
Pc13g10810 protein.
      
 0.579
Pc22g00960
Pc22g00960 protein.
      
 0.579
Pc12g04730
Pc12g04730 protein.
      
 0.463
Pc20g03140
Pc20g03140 protein.
   
  
 0.457
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.