STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc15g01010Pc15g01010 protein; Belongs to the sterol desaturase family. (261 aa)    
Predicted Functional Partners:
Pc12g04600
Pc12g04600 protein; Belongs to the sterol desaturase family.
   
 
0.922
Pc22g15550
Pc22g15550 protein.
   
 
 0.919
Pc22g06030
Pc22g06030 protein.
   
 0.878
Pc16g08670
Pc16g08670 protein.
   
 0.847
Pc15g00150
Pc15g00150 protein.
   
 
 0.812
Pc22g15220
Pc22g15220 protein; Belongs to the sterol desaturase family.
   
 
0.786
Pc16g14490
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
 
 0.759
Pc12g00300
Pc12g00300 protein.
   
 0.736
Pc18g05820
Pc18g05820 protein.
   
 0.736
Pc12g10870
Pc12g10870 protein; Belongs to the cytochrome P450 family.
   
 
 0.734
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.