STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g00120Pc16g00120 protein. (458 aa)    
Predicted Functional Partners:
Pc18g00500
Pc18g00500 protein; Belongs to the DapA family.
     
 0.980
Pc18g00490
Pc18g00490 protein.
     
 0.962
Pc22g19710
Pc22g19710 protein.
  
  
 
0.902
Pc22g05190
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
      
 0.812
Pc20g15580
Pc20g15580 protein.
      
 0.665
Pc21g22660
Pc21g22660 protein.
      
 0.649
Pc13g08290
Pc13g08290 protein.
   
 
 0.519
Pc22g25520
Pc22g25520 protein.
   
 0.503
Pc13g10210
Pc13g10210 protein.
    
 
 0.486
Pc21g04520
Pc21g04520 protein.
   
 0.454
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.