STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g07680Pc16g07680 protein. (403 aa)    
Predicted Functional Partners:
Pc21g14640
Pc21g14640 protein.
    
 0.857
Pc20g02180
Pc20g02180 protein.
   
 0.791
Pc12g08210
Pc12g08210 protein.
   
 0.667
Pc15g00170
Pc15g00170 protein.
   
 0.667
Pc20g00250
Pc20g00250 protein.
   
 0.667
Pc20g15660
Pc20g15660 protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.475
Pc22g01300
Pc22g01300 protein.
   
  
 0.475
Pc22g17070
Pc22g17070 protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.475
Pc16g14460
Pc16g14460 protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.435
Pc20g02220
Pc20g02220 protein.
    
 
 0.403
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.