STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g09320Pc16g09320 protein. (809 aa)    
Predicted Functional Partners:
Pc13g08290
Pc13g08290 protein.
    
 0.941
Pc12g00340
Pc12g00340 protein.
    
 0.687
Pc13g14600
Pc13g14600 protein.
   
 0.666
Pc13g14050
Pc13g14050 protein.
   
 0.666
Pc16g00020
Uncharacterized protein.
   
 0.666
Pc20g12410
Pc20g12410 protein.
    
 0.646
Pc13g04860
Pc13g04860 protein.
    
 0.641
Pc22g04050
Pc22g04050 protein.
    
 0.554
Pc13g12780
Pc13g12780 protein.
   
 0.535
Pc12g16470
Pc12g16470 protein.
    
 0.533
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.