STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g08460Pc16g08460 protein. (340 aa)    
Predicted Functional Partners:
Pc12g05750
Pc12g05750 protein.
  
 
 0.945
Pc12g02470
Pc12g02470 protein.
  
  
 
0.908
Pc16g10230
Pc16g10230 protein.
  
  
 
0.908
Pc21g11540
Pc21g11540 protein.
  
  
 
0.907
Pc18g01490
Pc18g01490 protein.
     
 0.466
Pc13g12580
Pc13g12580 protein.
  
 
 0.454
Pc13g10800
Pc13g10800 protein.
  
 
 0.454
Pc20g13410
Pc20g13410 protein.
  
 
 0.454
Pc22g04090
Pc22g04090 protein.
  
 
 0.454
Pc22g13500
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.454
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.