STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g10330Pc16g10330 protein. (190 aa)    
Predicted Functional Partners:
Pc22g18850
Pc22g18850 protein.
    
 
 0.993
Pc22g05050
Pc22g05050 protein.
   
 
 0.596
Pc22g23470
Pc22g23470 protein.
   
  
 0.589
Pc12g15550
Pc12g15550 protein.
      
 0.587
Pc13g07930
Pc13g07930 protein.
      
 0.587
Pc16g11110
Pc16g11110 protein.
      
 0.582
Pc16g12550
Pc16g12550 protein.
      
 0.566
Pc16g04940
Pc16g04940 protein.
      
 0.461
Pc16g04120
Pc16g04120 protein.
      
 0.436
Pc16g12600
Pc16g12600 protein.
      
 0.416
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.