STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g11030Pc16g11030 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (415 aa)    
Predicted Functional Partners:
Pc18g03540
Pc18g03540 protein.
   
    0.489
Pc22g07080
Pc22g07080 protein.
   
  
 0.472
Pc22g01790
Pc22g01790 protein.
      
 0.451
Pc22g13500
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.435
Pc22g06770
Pc22g06770 protein.
      
 0.430
Pc22g04250
Pc22g04250 protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
0.403
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.