STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g11310Pc16g11310 protein. (486 aa)    
Predicted Functional Partners:
Pc22g07050
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.944
Pc12g13950
Pc12g13950 protein; Belongs to the actin family.
    
 0.943
Pc12g13970
Pc12g13970 protein.
    
 0.899
Pc22g21830
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.882
Pc20g08600
Histone H2B; Belongs to the histone H2B family.
    
   0.823
Pc12g07170
Pc12g07170 protein.
    
  0.739
Pc22g21380
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.645
Pc22g07840
Pc22g07840 protein; Belongs to the actin family.
    
 0.516
Pc13g13340
Uncharacterized protein.
    
   0.448
Pc20g08590
Histone H2A; Belongs to the histone H2A family.
    
   0.448
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.