STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc16g14450Pc16g14450 protein. (153 aa)    
Predicted Functional Partners:
Pc22g20260
Pc22g20260 protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.712
Pc22g02470
Pc22g02470 protein.
   
 0.702
Pc18g02110
Pc18g02110 protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.698
rps1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.697
Pc20g04380
Pc20g04380 protein.
   
  0.695
Pc21g22970
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.695
Pc18g00610
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.694
Pc16g08960
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.686
Pc22g01560
Pc22g01560 protein.
   
 0.685
Pc18g02490
Pc18g02490 protein.
   
 0.684
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.