STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc18g03190Pc18g03190 protein. (206 aa)    
Predicted Functional Partners:
Pc12g06620
Pc12g06620 protein.
   
 0.930
Pc22g16740
Pc22g16740 protein.
    
 0.916
Pc21g19240
Pc21g19240 protein.
    
 0.833
Pc13g02850
Pc13g02850 protein.
    
 0.810
Pc22g07840
Pc22g07840 protein; Belongs to the actin family.
    
 0.740
Pc22g22250
Pc22g22250 protein.
    
 0.687
Pc21g06690
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
  0.604
Pc20g08240
Pc20g08240 protein.
   
 0.441
Pc22g21990
Pc22g21990 protein.
   
 0.441
Pc13g04390
Pc13g04390 protein.
   
 
  0.419
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.