STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc18g03260Pc18g03260 protein. (185 aa)    
Predicted Functional Partners:
Pc13g02760
Pc13g02760 protein.
   
 
 0.935
Pc21g07450
Pc21g07450 protein.
   
 
 0.915
Pc20g13000
Protein MAK16; Belongs to the MAK16 family.
   
   0.910
Pc22g17020
Pc22g17020 protein.
   
 
 0.907
Pc20g01020
Pc20g01020 protein.
   
 
 0.904
Pc13g13570
Pc13g13570 protein.
   
 
 0.899
Pc15g00080
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.899
Pc22g13900
Pc22g13900 protein.
   
 
 0.869
Pc18g05370
Pc18g05370 protein.
   
 
 0.826
Pc12g06170
Pc12g06170 protein.
   
 
 0.800
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.