STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc18g04710Pc18g04710 protein. (866 aa)    
Predicted Functional Partners:
Pc22g12670
Pc22g12670 protein.
    
 0.791
Pc21g01090
Pc21g01090 protein.
  
   0.515
Pc15g00930
Pc15g00930 protein.
  
     0.476
Pc21g05150
Pc21g05150 protein.
  
 
  0.467
Pc16g04600
Pc16g04600 protein.
  
 
  0.466
Pc06g01280
Pc06g01280 protein.
  
 
   0.462
Pc12g11800
Pc12g11800 protein.
  
 
  0.456
Pc22g10200
Pc22g10200 protein.
  
     0.450
Pc16g07890
Pc16g07890 protein.
  
     0.448
Pc21g02520
Pc21g02520 protein.
  
     0.445
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.