STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc18g00620Pc18g00620 protein. (261 aa)    
Predicted Functional Partners:
Pc21g00590
Phosphatidylinositol 3-kinase VPS34.
    
 0.961
Pc13g15270
Pc13g15270 protein.
   
 0.913
Pc13g07680
Pc13g07680 protein.
  
 
 
0.906
Pc20g01560
Pc20g01560 protein.
   
 
 0.872
Pc21g19880
E3 ubiquitin-protein ligase PEP5.
    
 
 0.870
Pc16g12830
Pc16g12830 protein.
    
 
 0.855
Pc12g12220
Pc12g12220 protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.851
Pc15g00640
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.842
Pc21g17530
Pc21g17530 protein.
   
 
 0.792
Pc21g03250
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.785
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.