STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc20g01420Pc20g01420 protein. (577 aa)    
Predicted Functional Partners:
Pc12g13980
Pc12g13980 protein.
  
  
 0.961
Pc22g21410
Pc22g21410 protein.
  
  
 0.909
pyrG
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
  
 0.778
Pc15g00490
Pc15g00490 protein.
  
  
 0.778
Pc16g14510
Pc16g14510 protein.
  
  
 0.778
Pc12g16220
Pc12g16220 protein.
  
  
 0.775
Pc21g21940
Pc21g21940 protein.
  
  
 0.738
Pc21g17970
Pc21g17970 protein.
  
  
 0.738
Pc22g20150
Pc22g20150 protein.
  
  
 0.738
Pc22g20960
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
  
  
 0.729
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.