STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc20g08530Pc20g08530 protein. (423 aa)    
Predicted Functional Partners:
Pc16g02590
Pc16g02590 protein; Belongs to the bacterial ribosomal protein bL17 family.
 
 
 0.981
Pc16g01860
Pc16g01860 protein.
  
 
 0.975
Pc20g11860
Pc20g11860 protein; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.971
Pc12g15090
Pc12g15090 protein.
  
 
 0.966
Pc22g14410
Pc22g14410 protein.
  
 
 0.965
Pc12g04610
Pc12g04610 protein.
  
 
 0.964
Pc12g10490
Pc12g10490 protein.
  
 
 0.964
Pc22g16270
Pc22g16270 protein.
  
 
 0.962
Pc21g21880
Pc21g21880 protein.
  
 
 0.942
Pc16g04120
Pc16g04120 protein.
   
 
 0.931
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.