STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc20g08580Pc20g08580 protein; Belongs to the complex I LYR family. (99 aa)    
Predicted Functional Partners:
Pc12g01050
Pc12g01050 protein.
   
 0.999
Pc12g08820
Pc12g08820 protein; Belongs to the complex I 30 kDa subunit family.
   
 0.999
Pc13g15390
Pc13g15390 protein.
   
 0.999
Pc13g12820
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.999
Pc16g10510
Pc16g10510 protein.
   
 0.999
Pc18g03280
Pc18g03280 protein.
   
 0.999
Pc18g03290
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.999
Pc20g11780
Pc20g11780 protein.
   
 0.999
Pc20g03810
Pc20g03810 protein.
   
 0.999
Pc21g14680
Pc21g14680 protein.
   
 0.999
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.