STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc20g13270Pc20g13270 protein. (203 aa)    
Predicted Functional Partners:
Pc22g23300
Nascent polypeptide-associated complex subunit beta.
   
 
 0.999
Pc16g12990
Pc16g12990 protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.982
Pc13g06740
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.980
Pc22g23310
Pc22g23310 protein.
   
 
 0.978
Pc16g10560
Pc16g10560 protein.
  
   0.976
Pc22g02060
Pc22g02060 protein.
   
   0.974
Pc16g09260
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.972
Pc20g02750
Pc20g02750 protein.
   
   0.968
Pc13g11570
Pc13g11570 protein.
   
 
 0.966
Pc20g13260
Pc20g13260 protein.
 
 
   0.963
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.