STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g09850Pc21g09850 protein. (376 aa)    
Predicted Functional Partners:
Pc16g00740
Pc16g00740 protein; Belongs to the glycosyl hydrolase 28 family.
      
 0.662
Pc22g22930
Pc22g22930 protein.
      
 0.651
Pc16g06840
Pc16g06840 protein.
   
  
 0.627
Pc21g13810
Pc21g13810 protein.
   
  
 0.627
Pc18g05490
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
      
 0.609
Pc20g01970
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
      
 0.609
aguA
Alpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan. Belongs to the glycosyl hydrolase 67 family.
      
 0.565
Pc14g00370
Rhamnogalacturonate lyase; Belongs to the polysaccharide lyase 4 family.
      
 0.470
Pc12g12910
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
      
 0.402
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.