STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g23170Pc21g23170 protein. (719 aa)    
Predicted Functional Partners:
Pc13g08850
Pc13g08850 protein.
   
 0.996
Pc20g08360
U3 small nucleolar RNA-associated protein 22.
   
 0.990
Pc15g00270
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.986
Pc21g02010
Pc21g02010 protein.
   
 0.984
Pc21g11160
Pc21g11160 protein.
   
 
 0.972
Pc12g07590
Pc12g07590 protein.
   
 
 0.955
Pc13g02750
Pc13g02750 protein; Belongs to the DEAD box helicase family.
  
0.951
Pc13g02830
Pc13g02830 protein.
   
 0.950
Pc16g09000
Pc16g09000 protein.
   
 0.948
Pc20g12310
Pc20g12310 protein.
   
 0.945
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.