STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g19410Pc21g19410 protein. (420 aa)    
Predicted Functional Partners:
Pc21g19500
Pc21g19500 protein.
   
   0.657
Pc12g12160
Pc12g12160 protein.
    
   0.650
Pc18g04100
Pc18g04100 protein.
    
   0.650
Pc22g01070
Pc22g01070 protein.
    
   0.650
Pc22g11050
Pc22g11050 protein.
    
   0.650
Pc22g15470
Pc22g15470 protein.
    
   0.650
Pc16g08360
Pc16g08360 protein.
    
   0.440
Pc13g03680
Pc13g03680 protein.
   
   0.422
Pc22g08360
Pc22g08360 protein.
   
   0.417
Pc21g08660
Small nuclear ribonucleoprotein Sm D2.
   
   0.415
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.